
Jmol: an open-source Java viewer for chemical structures in 3D
Jmol is a free, open source viewer of molecular structures useful for students, educators and researchers in chemistry, biochemistry and other fields dealing with molecular structure.
Demonstration of Jmol capabilities
Jmol can export to several 3D scene / 3D world / virtual reality / 3D printer formats, like VRML, X3D, IDTF, (U3D), Maya, OBJ or STL. Check out some sample files.
Download Jmol
As a user, you don't need to install or even download Jmol to be able to see web pages that use JSmol. The necessary files will be retrieved at the same time the web page is being read.
Jmol Documentation
This documentation describes and compares the different options available in Jmol scripts for generating surfaces, either based on the molecule or geometric. It also provides a testing and …
Jmol FAQ
JSmol is the HTML5 modality of Jmol, able to be embedded into web pages. All the functionality of Jmol (as a standalone application) is also present in JSmol, since both are generated from …
Colors - Jmol
Jmol interprets the backbone pattern of consecutive residues ("monomers") to identify continuous "polymers".
Pages of Jmol Project at SourceForge
The [email protected] mailing list is for specific discussion of Jmol software development issues. We assume that all subscribers to jmol-developers are also subscribers …
Surfaces in Jmol
There is a testing / demo page including a Jmol applet to see results. This documentation does not detail all the options, but aims to collect the different ways to render surfaces, and clarify …
NMR demo: JSmol Display - jmol.sourceforge.net
You can use the Jmol menu or alternatively select an IR mode from here. Reference: Google Docs
JSmol Display of GC/MS from pimento - jmol.sourceforge.net
The top display is the GC trace and the lower display is for the MS spectra. Clicking on a peak in the GC will load the appropriate Mol file and MS. Reference: Google Docs